生物信息学PPT（很珍贵）

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生物信息学PPT

一、基因芯片与基因表达

二、基因表达谱统计与分类分析

三、Ontology与基因功能注释/文本挖掘

四、基因调控元件与网络

五、代谢通路与信号传导

六、药物发现与合理设计

七、蛋白质组信息学

八、序列分析与基因组比较

九、生物信息学概论

十、数据挖掘

十一、图、类与概念

十二、关系与统计方法

十三、基因组与分子生物学概论

十四、信息整合（待补充）

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一、基因芯片与基因表达

[PPT]Microarray Technology

[PPT]Gene Chips

[PPT]The DNA Chip and The Process of DNA Chip

[PPT]Expression Data and Microarrays

[PPT]Introduction to DNA Microarray: A Columbus America in Biology

[PPT]Introduction to the biology and technology of DNA microarrays

[PPT]Some aspects of the design and analysis of gene expression ...

[PPT]Challenges In Microarray Processing

[PPT]Affymetrix Gene Chip Procedure

[PPT]MICROARRAYS and functional genomics

[PPT]Microarray technology in Functional Genomics

[PPT]Image Processing for cDNA Microarray Data

[PPT]Automated Interpretation of Fluorescence Microscope Images

[PPT]Bioinformatics for global gene expression

[PPT]Microarrays for Gene Expression Analysis

[PPT]Gene Expression Analysis using Microarrays

[PPT]Visualizing Genomic Data Microarrays

[PPT]Gene Expression

[PPT]Gene Expression Review

[PPT]Computing with Whole Genomes

[PPT]Functional analysis of microarray data

[PPT]Experimental Design

[PPT]Microrray Data Standardisation

[PPT]Databases for Microarrays



二、基因表达谱统计与分类分析

[PDF]Lab 1 - Pre-processing and Normalization 1 Part I - Data Input  

[PPT]Identifying differentially expressed genes and clusters of genes ...

[PPT]Gene Expression Analysis Using Microarrays

[PPT]Gene Expression Data Analysis  

[PPT]Computational analysis of genome-wide expression data

[PPT]Quantitative Methods to Analyze cDNA Microarray Data

[PPT]A Statistical Framework for Expression-Based Molecular ...

[PPT]Expression Data: Retrieval and Analysis Kat, Anita, Dan and Paul

[PPT]Analysis of Gene Expression Data ‐\ Experimental Variability ...

[PPT]Microarray analysis II Whole-genome expression analysis

[PPT]Computational analysis of gene expression data: from ...  

[PPT]Statistics for Microarraysinear and Nonlinear Modeling

[PPT]Multiple Testing and Prediction and Variable Selection

[PPT]Finding Gene Expression Relationships

[PPT]Bioinformatics Classification: Protein Function, Gene Expression ...

[PPT]REVIEW OF:Molecular Classification of Cancer: Class Discovery and Class Prediction by Gene Expression Monitoring


[PPT]Extraction of Correlated Gene Clusters by Multiple Graph Comparison

[PPT]Clustering of genes expression data.
[PPT]Clustering Analysis of Gene Expression Data

[PPT]An Overview of Clustering Methods

[PPT]Subset Clustering

[PPT]The Subspace Clustering Problem

[PPT]DB Seminar Series: HARP: A Hierarchical Algorithm with Automatic ...

[PPT]Part 1 Microarray Timeseries Analysis with replicates OSM and EGF ...

[PPT]RNA Clustering

[PPT]Knowledge discovery by clustering microarray data based on ...

[PPT]Clustering Temporal Gene Expression Data  

[PPT]Clustering of the Yeast’s gene expression time series data.

[PPT]Multi- and megavariate data analysis of hierarchial biological ...

[PPT]NAME – Software for gene expression time series data and ...

[PPT]Part 1 Microarray Timeseries Analysis with replicates OSM and EGF ...

[PPT]Constrained Clustering for Pattern Discovery  

[PPT]Comparative Clustering Analysis of Gene Expression Profiles(GeneCut)

[PPT]Clustering in Microarray Data-mining and Challenges Beyond
[PPT]Modified Multi-dimensional Scaling Algorithm for Mining Gene ...  

　

[PPT]Tissue Classification with Gene Expression Profiles

[PPT]Class prediction and Discovery Using Gene Expression Data

PPT]Classification and diagnostic prediction using artificial neural ...

[PPT]Classification, subtype discovery, and prediction of outcome in ...

[PPT]Molecular classification of cutaneous malignant melanoma by gene ...

[PPT]Distinct types of diffuse large B-cell lymphoma identified by ...  

[PPT]Model-based analysis of oligonucleotide arrays: model validation ...

[PPT]Data Reduction and Gene Selection Using Gene Expression Data

[PPT]Quantization and Distance Function Selection for Discrimination ...

[PPT]False Discovery Rate Control: Theory and Applications in ...  

[PPT]Gene Selection For A Discriminant Microarray Data Analysis


[PPT]Learning Structure in Bayes Nets (Typically also learn CPTs here ...

[PPT]Using Bayesian Networks to Analyze Expression Data

[PPT]Bayesian Networks - an introduction  

[PPT]Bioinformatics for global gene expression

[PPT]Micro Array Explorer MAExplorer

[PPT]ArrayExpress

MAExplorer - Microarray Exploratory Data Analysis

[PPT]Microrray Software Review

[PPT]Vector Xpression Product overview

　

[PPT]Bioinformatics Classification: Protein Function, Gene Expression ...

[PPT]Bioinformatic approaches to functional genomics

[PPT]Integrated bacterial genomics for the discovery of novel ...

[PPT]THE CHARACTERIZATION OF ANTIZYME IN DEVELOPING Xenopus Laevis ... 　

　

三、Ontology与基因功能注释/文本挖掘

[PPT]What is an Ontology?

[PPT]Ontologies for Knowledge Discovery in the Post-Genomic Age

[PPT]MGED Ontology Working Group Report

[PPT]MGED Annotation

[PPT]GO (Gene Ontology)

[PPT]GO : Gene ontology consortium

[PPT]Annotating Microarray Data with GeneOntology-Terms

[PPT]Genome Annotation

[PPT]Genome_annotation_techniques

[PPT]Case-based reasoning driven gene annotation

[PPT]Searching for a gene

[PPT]Bio-Ontologies: Bio-Ontologies: Their Creation and Design

[PPT]Representation of biological function in database


[PPT]Ontologies

[PPT]ONTOLOGICAL ANALYSIS

[PPT]Grid, Ontologies and the Semantic Web

[PPT]Tools for Ontology-based Corpus Annotation

[PPT]Ontological Analysis of Taxonomic Relationships (Towards a ...

[PPT]Ontology-Based Integration of Information – A Survey of ...  

[PPT]Issue…Data Integration

[PPT]Integrative Genome Annotation Pipeline (iGAP)



[PPT]Basic Principles of Conceptualization and Measurement

[PPT]When Corpus Meets Theory

[PPT]A Theory of Theory Formation

[PPT]MyGrid

[PPT]Representation and Coding of Medical Data G4020

[PPT]Randomization in Clinical Trials



[PPT]Constraint-Techniques for Collaborative Design

[PPT]Specifying XML Data with Integrity Constraints

[PPT]XML

[PPT]XML application in bioinformatics and an example of using XML for ...

[PPT]Gene Expression Markup Language (GEML).

[PPT]Respective contributions of MIAME, GeneOntology and UMLS for ...

[PPT]Software Agents and Automated Gene Database Development

[PPT]SRS backbone for genome info & data grids

[PPT]Information Extraction in Biology



[PPT]Mining The Biomedical Literature; A Key Capability For Genomics ...

[PPT]A Study of Smoothing Methods for Language Models Applied to ...

[PPT]Some Natural Language Processing (NLP) Tasks

[PPT]Automatic Text Categorization



四、基因调控元件与网络

[PPT]Summary of Transcriptional Regulation

[PPT]Regulation of eukaryote gene expression Some examples

[PPT]Dissecting complex regulatory regions and their associated ...

[PPT]Common Motifs in Kinases and Phosphatases that Share a Substrate

[PPT]The Scoring Matrix Used with Aligned Promoter Sequences

[PPT]Gene Expression – Transcription Regulation

[PPT]Assessing Clusters and Motifs from Gene Expression Data  

[PPT]Large Scale expression Profiling to find transcription factor ...

[PPT]Analyzing Promoter Sequences with Multilayer Perceptrons

[PPT]Biooinformatic tools for detecting regulatory elements shared by ...

[PPT]Mining for Transcription Factor Binding Motifs in Drosophila ...

[PDF]E-box motifs within the human vasopressin gene promoter ...

[PPT]Motif

[PDF]Promoter

　

[PPT]Genetic network analysis – gene and protein expression measurements

[PPT]Beyond Co-expression: Gene Network Inference

[PPT]Forward Engineering of Genetic Circuits

[PPT]Genetic network inference: from co-expression clustering to ...

[PPT]Qualitative Simulation of Large and Complex Genetic Regulatory ...

[PPT]Estimation of Genetic Network by using Bayesian Network and ...

[PPT]Using Discretization and Bayesian Inference Network Learning for

[PPT]Bayesian Network and Nonparametric Heteroscedastic Regression for ...

[PPT]A Deep Basin of Attraction in the Yeast Transcriptome Uncovered ...

[PPT]Identifying Gene Regulatory Networks from Experimental Data

[PPT]Inferring subnetworks from perturbed expression profiles Dana Pe ...

[PPT]Discrete Genetic Networks

[PPT]Modelling of metadata and MDD in application to analysis of gene ...

[PPT]Two Complementary Methods for Reverse Engineering Genetic ...

[PPT]GeneNet : a gene network database and its automated visualization

[PPT]Gene Networking by Information Theory

[PPT]Inferring subnetworks from perturbed expression profiles Dana Pe ...

[PPT]Control of Gene Expression

[PPT]Small-World Networks



五、代谢通路与信号传导

[PPT]Pathway Bioinformatics---Database, Software, and Discovery

[PPT]Biopathway reconstruction with new clustering algorithm

[PPT]Pathways Subgroup

[PPT]Gene expression and protein pathways

[PPT]Analysis of Gene Expression Data with Pathway Scores

[PPT]Metabolic Pathways Scientific Database

[PPT]The MetaCyc Metabolic Pathway Database

[PDF]Ways to regulate metabolic activity: A. Regulation of enzyme ...  

[PPT]Math Clinic Progress Report(metabolic and signal pathways)


[PPT]BioPathways Consortium

[PPT]PTrees and DNA Sequence Pathway Analysis

[PPT]Pathways 3.0 Microarray Analysis Software

[PPT]PathBlazer product overview

[PPT]Definition and Properties of the Haemophilus influenzae Metabolic ...

[PPT]Microarray Analysis of Drosophila Development During ...

[PPT]Creating Model Cells from Molecular Interaction Data

[PPT]BIND- The Biomolecular Interaction Network Database  

[PDF]Definition of the Interferon- Receptor-binding Domain on the TYK2 ...

[PPT]The Jak/Stat Signaling Pathway  



六、药物发现与合理设计

[PPT]Drug Discovery and Genomics  

[PPT]Case Study #1 Use of bioinformatics in drug development and ...

[PPT]Drug Discovery and the Convergence of Biology, Informatics and ...

[PPT]High Performance Computing for Proteomics and Drug Discovery

[PPT]Interaction between GPCRs and Ion Channels

[PPT]Roles of Bioinformatics in the Pharmaceutical Industry Charlie ...

[PPT]Pharm 202 Computer Aided Drug Design

[PPT]Role of Informatics in Rational Drug Design

[PPT]Measurement and Optimization Strategies for Enhanced Enterprise ...

[PPT]Map Kinases for Drug Discovery

[PPT]Dose-response relationship

[PPT]Strategy for designing drugs to improve the treatment of ...

[PPT]Detecting Broad-Band and Selective Correlation Patters among Gene Expression and Drug Activity Data

[PPT]SVM for Pharmaceutical Classification



七、蛋白质组信息学

[PPT]PROTEOMICS

[PPT]Molecular Biologists Guide to Proteomics

[PPT]Proteomics to study genes and genomes

[PPT]Integration of heterogeneous informations sources for proteomics ...

[PPT]Analysis of Protein Geometry, Particularly Related to Packing at ...

[PPT]Historical Perspectives in the Study of Proteins

[PPT]Bioinformatics Tutorial IIrotein Analysis

[PPT]Approaches to Biochemistry: Week 1 Protein Structure and Function

[PPT]Threading-based Protein Structure Prediction

[PPT]Protein diversity as a result of transcript isoform variation in ...

[PPT]FACTS inferred Protein Interactions

[PPT]Biomolecular processes as concurrent computation

[PPT]Methods for identifying membrane proteins (GPCR’s)

[PPT]An Algorithmic Approach to Peptide Sequencing via Tandem Mass ...

[PPT]Molecular Modeling and Recognition of Protein Structures

[PPT]Macromolecular Structure Database group  

[PPT]Secondary structure prediction (3)

[PPT]Analysis of Protein Geometry, Particularly Related to Packing at ...

[PPT]String Kernels for Protein Classification

[PPT]Protein Architecture and Structure Alignment

[PPT]Unification of sequence and structure analysis of proteins: ...

[PPT]A Genetic Algorithm Based Approach to Understanding Protein Water ...

[PPT]Computer Aided Molecular Design

[PPT]Design of multistable DNA molecules

[PPT]KINETICS

[PPT]Chemical Informatics

[PPT]Enzymes

[PPT]SWISS-PROT Databases

[PPT]An Example-Based Modeling System for the Synthesis of 3D Models

[PPT]Chemical Structure Representation and Search Systems

[PPT]Integrated Genomic and Proteomic Analysis of a Systematically ...



八、序列分析与基因组比较

[PPT]Finding RetrievingSimilarityHomologyAlignment

[PPT]Sequence Alignment Algorithms

[PPT]Multiple Sequence Alignments

[PPT]Information Encoding in Biological Molecules: DNA and protein ...

[PPT]Analysis of DNA sequences

[PPT]Sequence Analysis Techniques in BioNumerics

[PPT]Fine Structure and Analysis of Eukaryotic Genes  

[PPT]Evaluation of Techniques for Classifying Biological Sequences

[PPT]Computational Gene Finding

[PPT]4. MORGAN, a decision tree system for gene finding

[PPT]Gene Finding

[PPT]One Gene, Many Sequences

[PPT]DNA3: HMM  

[PPT]Bioinformatics: Searching Sequence Databases

[PDF]The Molecular Biology Database Collection: 2002 update

[PPT]Quality Control In Biological Databases  

[PDF]Sequences Just Upstream of the Simian Immunodeficiency Virus Core ...

[PPT]Genome Analysis and Genome Comparison

[PPT]Comparing genes and genomes

[PPT]Genome Analysis II Comparative Genomics  

[PDF]Comparative Genomics of the Eukaryotes

[PPT]C-value Paradox

[PPT]GENETIC EPIDEMIOLOGY  

[PPT]Algorithmic Problems Related to Sequences and Phylogenetic Trees

[PPT]DNA Clustering
[PPT]GenomicHypothesisCreator

　

九、生物信息学概论

[PPT]Quick Overview of Bioinformatics

[PPT]Bioinformatics The interface between Biological and Computational ...

[PDF]BIOINFORMATICS

[PPT]Introduction to bioinformatics

[PDF]Bioinformatics